Locus Rank
64

Gene

Id
217
Gene Name
SDCCAG8
Duplicated
False
Maternal
True
Gene Not Within Locus (Nearby
False
Gene Description
Mouse Phenotype
Additional Image
Allen Brain
Allen Regions
Zfin In Situ
Zfin Brain Areas
Published Zebrafish Pehnotype
Not In Allen Brain
False
ZFIN Link
http://zfin.org/ZDB-GENE-090313-318
Allen Link
http://mouse.brain-map.org/gene/show/52656
More Additional Images
Papers

Locus Rank

Locus Rank
64
Genes in Region
AKT3 SDCCAG8
Associated Snps
rs77149735 chr1_243881945_I rs10803138 rs14403
GWAS Region (hg19)
chr1:243503719-244002945
Genes Skipping
Ricopili Plot Surrounding Area
Distance On Each Side Of Locus In Above Plot
1 MB
Ricopili Plot
Gwas And Surrounding Region Pic
Gwas Region Pic
Genes In Locus Rank
AKT3
SDCCAG8

Sequence 1

Ensembl Gene Name
sdccag8
Harvard Allele
a326
Mutation Area - WT DNA Sequence
gcatgttattattacctctgtttccagtgaacatgtttttagtattttaatttaatctaatatgttctaagtttaaaccatggcactcatcttttgttaatttagttgtattgtttttaattatagtttgcccagtattaataaaaaaaaaaacctgtgtaaacatcatatatattgacctgatttgattgtgctgtctagcagAGAGCCACAGATGATGGCAGTAGCAGTCAGCCTGGTGTTCATAACTTGGTTCCCATCATAAACAACCAGTCTGAGTACATTCAGCACCTGGAGGCTGAGGTCAAGTTCTGCAAGgtcagtcctattaattaagatgagatattatcaatgagtttatcttaattaattcagtgagtctgattatgaggggtttcctagatgaagcaagtgttattcatctggtcatttggtgtttttttgttcatagttattgctctgttttttttcttcttaatattacttttggtttgtttttttaagGAGGAGCTCCTGGAAATGAAGCAGAGAGTTAGAGTGGTGATCGTGGAGAATGAGAAACTACACCATGAGCTGAAAGCAAAGACGATTGAAGACACGCTTAAAGAATACACATTTGTTGATAGCACAgtatgtatcatagagacttttagtaatgaaattgaagatgtataattgcatgtcttatgaaaatgtatgacattaaaacctgcagtcagtttatacatactatatatacagtggtgtca
Mutation Area - Mutant DNA Sequence
gcatgttattattacctctgtttccagtgaacatgtttttagtattttaatttaatctaatatgttctaagtttaaaccatggcactcatcttttgttaatttagttgtattgtttttaattatagtttgcccagtattaataaaaaaaaaaacctgtgtaaacatcatatatattgacctgatttgattgtgctgtctagcagAGAGCCACAGATGATGGCAGTAGCAGTCATGACGCAAGGTATACGCAAGgtcagtcctattaattaagatgagatattatcaatgagtttatcttaattaattcagtgagtctgattatgaggggtttcctagatgaagcaagtgttattcatctggtcatttggtgtttttttgttcatagttattgctctgttttttttcttcttaatattacttttggtttgtttttttaagGAGGAGCTCCTGGAAATGAAGCAGAGAGTTAGAGTGGAGAATGAGAAACTACACCATGAGCTGAAAGCAAAGACGATTGAAGACACGCTTAAAGAATACACATTTGTTGATAGCACAgtatgtatcatagagacttttagtaatgaaattgaagatgtataattgcatgtcttatgaaaatgtatgacattaaaacctgcagtcagtttatacatactatatatacagtggtgtca
Guide RNA Target Sites
GATGGCAGTAGCAGTCAGCCTGG
TGAGTACATTCAGCACCTGGAGG
GGCTGAGGTCAAGTTCTGCAAGg
GAGAGTTAGAGTGGTGATCGTGG
Genotyping Primers
f, gcatgttattattacctctgtttccagtgaacatgt
r, tgacaccactgtatatatagtatgtataaactgactgc
Alignment of WT and Mutant Sequences w/ gRNA Targets (cyan) and Genotyping Primers (pink) Shown on WT Sequence
Allele
65bpD,9bpD
WT Genotyping Size
749
WT Protein Sequence
MKPSLESDEEEELGALQKTLRERANRSIQHLSSMLAGHSSDSETSEPNQQELLSSVQQNP
CSPVQQSEAVSQLRSLLQMKTKDANIQSLSPSRRKLAAKRATDDGSSSQPGVHNLVPIIN
NQSEYIQHLEAEVKFCKEELLEMKQRVRVVIVENEKLHHELKAKTIEDTLKEYTFVDSTL
NMEHTAENTLKERLGSVNQAEDHKWRKEMEQLKCLYQAQTETLEAQVVSLKKDLACIQKE
YEESKERLRHKEAMAVAAGTGQRVSGLCLKCAQHEAVLAETHTNVHVQSIERLTKERDEL
MTVLCSLRASQTDAQQREWGAYQQVKQAVEMAEEANLEKTRALVQCEHFHNELTRQRERL
ERELASEQDKISQAREAARSESKKEREELMQTLSSLSQKVAELQGLLDRGERDRNSLNSQ
LEEAYKKLTVQETDSSKMCAELRFLLSQAQLKKEEAERDVRDISSKLGRQLELAEQEVQK
LGVELSGYRQRLEEAQRAEGRARAEAAGLAEGLSRAQRQLHLTRQEKEASERCCGEDMAA
LTFQAQRRERELTQTLQQMEAQHEKSVRETDALLSAQNSLIRKLKEECHTLGAKLEELAQ
SSRAEMEQLSLEREHLQESAEKLRGRCEEMEEQCVQHGRMHQRMKQRLQQLDQHCQASSQ
QVLQLLSRQKQLMQERQQLTEDLHSLKSQVHAGKRMDRLAV-
Mutant Protein Sequence
MKPSLESDEEEELGALQKTLRERANRSIQHLSSMLAGHSSDSETSEPNQQELLSSVQQNP
CSPVQQSEAVSQLRSLLQMKTKDANIQSLSPSRRKLAAKRATDDGSSSHDARYTQGGAPG
NEAES-
Mutant Genotyping Size
675

Behavior Data

Behavior Data Summary
None
Behavior Data Description 1
Dark flash block 1 start Merged section Pvalue = not significant 10 wt vs 20 hom ribgraph_mean_ribbon_fullboutdata_dpix_a0darkflash103.png
Behavior Data Graph 1
Behavior Data Description 2
Day all prepulse tap Merged section Pvalue = 0.0421 10 wt vs 20 hom ribgraph_mean_ribbon_fullboutdata_dpix_dayprepulseinhibition100d.png
Behavior Data Graph 2
Behavior Data Description 3
Features of movement entire protocol Graph Pvalue = not significant Merged section Pvalue = not significant 10 wt vs 20 hom ribgraph_mean_ribbonbout_aveboutdisp_10min_combo.png
Behavior Data Graph 3
Behavior Data Description 4
Frequency of movement entire protocol Graph Pvalue = 0.0122 Merged section Pvalue = 0.0153 10 wt vs 20 hom ribgraph_mean_ribbonbout_dpixnumberofbouts_10min_combo.png
Behavior Data Graph 4
Behavior Data Description 5
Location in well entire protocol Graph Pvalue = not significant Merged section Pvalue = not significant 10 wt vs 20 hom ribgraph_mean_ribbonbout_averhofrac_10min_combo.png
Behavior Data Graph 5
Behavior Data Description 6
None
Behavior Data Graph 6
None
Behavior Data Description 7
None
Behavior Data Graph 7
None
Behavior Data Description 8
None
Behavior Data Graph 8
None
Behavior Data Description 9
None
Behavior Data Graph 9
None
Behavior Data Description 10
None
Behavior Data Graph 10
None
Behavior Data Description 11
None
Behavior Data Graph 11
None
Behavior Data Description 12
None
Behavior Data Graph 12
None
Behavior Data Description 13
None
Behavior Data Graph 13
None
Behavior Data Description 14
None
Behavior Data Graph 14
None